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Table 3B. Genome statistics for M. adhaerens HP15

From: Complete genome sequence of Marinobacter adhaerens type strain (HP15), a diatom-interacting marine microorganism

Attribute Value % of totala
Genome size (bp) 4,651,725  
DNA Coding region (bp) 4,178,502 89.8
DNA G+C content (bp) 2,644,970 56.9
Number of replicons 3  
Extrachromosomal elements 2  
Total genesb 4,410  
tRNA genes 51 1.16
5S rRNA genes 3 0.07
16S rRNA genes 3 0.07
23S rRNA genes 3 0.07
Protein-coding genes 4,355 98.66
Genes assigned to COGs 3,027 67.54
Genes with Pfam domains 2,918 65.1
1 Pfam domain 2,041 45.54
2 Pfam domains 598 13.34
3 Pfam domains 194 4.33
4 or more Pfam domains 85 1.9
Genes with signal peptides 765 17.07
Genes with transmembrane helices 1,043 23.27
1 transmembrane helix 341 7.61
2 transmembrane helices 154 3.44
3 transmembrane helices 72 1.61
4 or more transmembrane helices 476 10.62
Genes in paralogous clusters 570 12.72
Genes with 1 paralog 364 8.12
Genes with 2 paralogs 63 1.41
Genes with 3 paralogs 26 0.58
Genes with 4 or more paralogs 117 2.61
Pseudo/hypothetical genes 391 8.72
Conserved hypothetical genes 668 14.90
Genes for function prediction 3,363 75.03
  1. a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.
  2. b) Also includes 54 pseudogenes and 5 other genes.