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Table 4 Number of genes associated with the 25 general COG functional categories

From: High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7T

Code Value % of totala Description
J 181 4.02 Translation
A 0 0.00 RNA processing and modification
K 299 6.64 Transcription
L 233 5.17 Replication, recombination and repair
B 3 0.07 Chromatin structure and dynamics
D 39 0.87 Cell cycle control, mitosis and meiosis
Y 0 0.00 Nuclear structure
V 46 1.02 Defense mechanisms
T 134 2.98 Signal transduction mechanisms
M 217 4.82 Cell wall/membrane biogenesis
N 35 0.78 Cell motility
Z 0 0.00 Cytoskeleton
W 0 0.00 Extracellular structures
U 106 2.35 Intracellular trafficking and secretion
O 156 3.46 Posttranslational modification, protein turnover, chaperones
C 240 5.33 Energy production and conversion
G 312 6.93 Carbohydrate transport and metabolism
E 482 10.70 Amino acid transport and metabolism
F 87 1.93 Nucleotide transport and metabolism
H 158 3.51 Coenzyme transport and metabolism
I 153 3.40 Lipid transport and metabolism
P 209 4.64 Inorganic ion transport and metabolism
Q 91 2.02 Secondary metabolites biosynthesis, transport and catabolism
R 453 10.06 General function prediction only
S 444 9.86 Function unknown
ā€“ 775 17.21 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the annotated genome