Table 4 Number of genes associated with the 25 general COG functional categories
Code | Value | % of totala | Description |
|---|---|---|---|
J | 181 | 4.02 | Translation |
A | 0 | 0.00 | RNA processing and modification |
K | 299 | 6.64 | Transcription |
L | 233 | 5.17 | Replication, recombination and repair |
B | 3 | 0.07 | Chromatin structure and dynamics |
D | 39 | 0.87 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 46 | 1.02 | Defense mechanisms |
T | 134 | 2.98 | Signal transduction mechanisms |
M | 217 | 4.82 | Cell wall/membrane biogenesis |
N | 35 | 0.78 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 106 | 2.35 | Intracellular trafficking and secretion |
O | 156 | 3.46 | Posttranslational modification, protein turnover, chaperones |
C | 240 | 5.33 | Energy production and conversion |
G | 312 | 6.93 | Carbohydrate transport and metabolism |
E | 482 | 10.70 | Amino acid transport and metabolism |
F | 87 | 1.93 | Nucleotide transport and metabolism |
H | 158 | 3.51 | Coenzyme transport and metabolism |
I | 153 | 3.40 | Lipid transport and metabolism |
P | 209 | 4.64 | Inorganic ion transport and metabolism |
Q | 91 | 2.02 | Secondary metabolites biosynthesis, transport and catabolism |
R | 453 | 10.06 | General function prediction only |
S | 444 | 9.86 | Function unknown |
– | 775 | 17.21 | Not in COGs |