Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 2,681,495 | 100 |
DNA coding (bp) | 248,306 | 92.60 |
DNA G + C (bp) | 1,439,962 | 53.7 |
DNA scaffolds | 68 | 100 |
Total genes | 2609 | 100 |
Protein coding genes | 2543 | 97.47 |
RNA genes | 66 | 2.59 |
Pseudo genes | 7 | 0.26 |
Genes in internal clusters | 516 | 19.77 |
Genes with function prediction | 2062 | 79.03 |
Genes assigned to COGs | 1747 | 66.96 |
Genes with Pfam domains | 2126 | 81.48 |
Genes with signal peptides | 169 | 6.47 |
Genes with transmembrane helices | 630 | 24.14 |
CRISPR repeats | 1 |