Table 5 Number of genes associated with general COG functional categories
From: Complete genome sequence of Novosphingobium pentaromativorans US6-1T
Code | Value | % age | Description |
|---|---|---|---|
J | 167 | 3.1 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 267 | 4.9 | Transcription |
L | 289 | 5.3 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 36 | 0.7 | Cell cycle control, Cell division, chromosome partitioning |
V | 50 | 0.9 | Defense mechanisms |
T | 122 | 2.2 | Signal transduction mechanisms |
M | 245 | 4.5 | Cell wall/membrane/envelope biogenesis |
N | 64 | 1.2 | Cell motility |
U | 76 | 1.4 | Intracellular trafficking and secretion |
O | 172 | 3.1 | Posttranslational modification, protein turnover, chaperones |
C | 294 | 5.4 | Energy production and conversion |
G | 177 | 3.2 | Carbohydrate transport and metabolism |
E | 272 | 5.4 | Amino acid transport and metabolism |
F | 67 | 3.2 | Nucleotide transport and metabolism |
H | 131 | 5.0 | Coenzyme transport and metabolism |
I | 260 | 4.8 | Lipid transport and metabolism |
P | 264 | 4.8 | Inorganic ion transport and metabolism |
Q | 100 | 1.8 | Secondary metabolite biosynthesis, transport and catabolism |
R | 382 | 7.0 | General function prediction only |
S | 351 | 6.4 | Function unknown |
- | 1676 | 30.7 | Not in COGs |