Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Segniliparus rotundus type strain (CDC 1076T)
Code | Value | %age | Description |
|---|---|---|---|
J | 134 | 4.3 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 126 | 4.1 | Transcription |
L | 114 | 3.7 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 22 | 0.7 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 20 | 0.7 | Defense mechanisms |
T | 58 | 1.9 | Signal transduction mechanisms |
M | 97 | 3.1 | Cell wall/membrane biogenesis |
N | 4 | 0.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 23 | 0.7 | Intracellular trafficking, secretion, and vesicular transport |
O | 82 | 2.7 | Posttranslational modification, protein turnover, chaperones |
C | 141 | 4.6 | Energy production and conversion |
G | 125 | 4.1 | Carbohydrate transport and metabolism |
E | 209 | 6.8 | Amino acid transport and metabolism |
F | 77 | 2.5 | Nucleotide transport and metabolism |
H | 116 | 3.8 | Coenzyme transport and metabolism |
I | 117 | 3.8 | Lipid transport and metabolism |
P | 103 | 3.3 | Inorganic ion transport and metabolism |
Q | 85 | 2.8 | Secondary metabolites biosynthesis, transport and catabolism |
R | 247 | 8.0 | General function prediction only |
S | 149 | 4.8 | Function unknown |
- | 1,272 | 41.3 | Not in COGs |