Table 3. Genome Statistics
From: Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 9,127,347 | 100.00% |
DNA Coding region (bp) | 8,163,680 | 89.44% |
DNA G+C content (bp) | 4,128,036 | 45.23% |
Number of replicons | 1 | |
Extrachromosomal elements | 0 | |
Total genes | 7,397 | 100.00% |
RNA genes | 95 | 1.28% |
rRNA operons | 6 | |
Protein-coding genes | 7,302 | 98.72% |
Pseudo genes | 110 | 1.49% |
Genes with function prediction | 4,616 | 62.40% |
Genes in paralog clusters | 1,705 | 23.05% |
Genes assigned to COGs | 4,451 | 60.17% |
Genes assigned Pfam domains | 4,685 | 63.34% |
Genes with signal peptides | 2,251 | 30.43% |
Genes with transmembrane helices | 1,635 | 22.10% |
CRISPR repeats | 0 |