Table 3. Genome Statistics
From: Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IAT)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,205,686 | 100.00% |
DNA coding region (bp) | 2,907,874 | 90.71% |
DNA G+C content (bp) | 1,984,066 | 61.89% |
Number of replicons | 4 | |
Extrachromosomal elements | 3 | |
Total genes | 3,235 | 100.00% |
RNA genes | 82 | 2.53% |
rRNA operons | 6 | |
Protein-coding genes | 3,153 | 97.47% |
Pseudo genes | 82 | 2.13% |
Genes with function prediction | 2,214 | 68,44% |
Genes in paralog clusters | 661 | 20.43% |
Genes assigned to COGs | 2,221 | 68.66% |
Genes assigned Pfam domains | 2,297 | 71.00% |
Genes with signal peptides | 686 | 21.21% |
Genes with transmembrane helices | 858 | 26.52% |
CRISPR repeats | 4 |