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Table 1. Classification and general features of Bacteroides timonensis strain AP1T according to the MIGS recommendations [43]

From: Genome sequence and description of Bacteroides timonensis sp. nov.

MIGS ID Property Term Evidence codea
  Current classification Domain Bacteria TAS [44]
   Phylum Bacteroidetes TAS [45,46]
   Class Bacteroidia TAS [45,47]
   Order Bacteroidales TAS [45,48]
   Family Bacteroidaceae TAS [49,50]
   Genus Bacteroides IDA [49,5154]
   Species Bacteroides timonensis IDA
   Type strain AP1T IDA
  Gram stain Negative IDA
  Cell shape Rod IDA
  Motility Non motile IDA
  Sporulation Non sporulating IDA
  Temperature range Mesophile IDA
  Optimum temperature 37°C IDA
MIGS-6.3 Salinity Unknown IDA
MIGS-22 Oxygen requirement Anaerobic IDA
  Carbon source Unknown IDA
  Energy source Unknown IDA
MIGS-6 Habitat Human gut IDA
MIGS-15 Biotic relationship Free living IDA
  Pathogenicity Unknown  
  Biosafety level 2  
MIGS-14 Isolation Human feces  
MIGS-4 Geographic location France IDA
MIGS-5 Sample collection time November 2011 IDA
MIGS-4.1 Latitude 43.296482 IDA
MIGS-4.1 Longitude 5.36978 IDA
MIGS-4.3 Depth surface IDA
MIGS-4.4 Altitude 0 m above sea level IDA
  1. Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [55]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.