Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377T)
Code | Value | % age | Description |
|---|---|---|---|
J | 149 | 3.1 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.0 | RNA processing and modification |
K | 198 | 4.1 | Transcription |
L | 153 | 3.2 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 21 | 0.4 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 70 | 1.5 | Defense mechanisms |
T | 197 | 4.1 | Signal transduction mechanisms |
M | 164 | 3.4 | Cell wall/membrane biogenesis |
N | 159 | 3.3 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 191 | 4.0 | Intracellular trafficking and secretion |
O | 138 | 2.9 | Posttranslational modification, protein turnover, chaperones |
C | 164 | 3.4 | Energy production and conversion |
G | 169 | 3.5 | Carbohydrate transport and metabolism |
E | 213 | 4.5 | Amino acid transport and metabolism |
F | 64 | 1.3 | Nucleotide transport and metabolism |
H | 135 | 2.8 | Coenzyme transport and metabolism |
I | 96 | 2.0 | Lipid transport and metabolism |
P | 150 | 3.1 | Inorganic ion transport and metabolism |
Q | 60 | 1.3 | Secondary metabolites biosynthesis, transport and catabolism |
R | 432 | 9.1 | General function prediction only |
S | 285 | 6.0 | Function unknown |
- | 2018 | 42.3 | Not in COGs |