From: Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
Phylum | Type strains | Species / subsp. | %Synonyms | Type Genome sequences | Non-type Genome Sequences | Coverage | Type Genomes proposed |
---|---|---|---|---|---|---|---|
Crenarchaeota | 57 | 61 | 6.6 | 33 | 0 | 57.9 | - |
Euryarchaeota | 314 | 388 | 19.1 | 143 | 4 | 45.5 | 9 |
Thaumarchaeota | 1 | 1 | 0.0 | 1 | 0 | 100.0 | - |
Aquificae | 29 | 31 | 6.5 | 8 | 0 | 27.6 | 2 |
Thermotogae | 37 | 38 | 2.6 | 14 | 1 | 37.8 | 13 |
Thermodesulfobacteria | 7 | 8 | 12.5 | 2 | 1 | 28.6 | 4 |
Deinococcus-Thermus | 71 | 76 | 6.6 | 19 | 0 | 26.8 | 18 |
Chrysiogenetes | 4 | 4 | 0.0 | 2 | 0 | 50.0 | - |
Chloroflexi | 27 | 28 | 3.6 | 11 | 0 | 40.7 | - |
Nitrospirae | 12 | 12 | 0.0 | 2 | 0 | 16.7 | 3 |
Deferribacteres | 12 | 12 | 0.0 | 6 | 0 | 50.0 | 1 |
Cyanobacteria | 88 | 90 | 2.2 | 9 | 2 | 10.2 | - |
Chlorobi | 16 | 22 | 27.3 | 9 | 0 | 56.3 | - |
Proteobacteria | 3,541 | 4,323 | 18.1 | 364 | 35 | 10.3 | 385 |
Firmicutes | 1,875 | 2,263 | 17.1 | 311 | 14 | 16.6 | 285 |
Tenericutes | 234 | 258 | 9.3 | 25 | 0 | 10.7 | 2 |
Actinobacteria | 2,439 | 2,953 | 17.4 | 145 | 5 | 5.9 | 129 |
Planctomycetes | 15 | 19 | 21.1 | 10 | 0 | 66.7 | 2 |
Chlamydiae | 17 | 20 | 15.0 | 8 | 0 | 47.1 | - |
Spirochaetes | 112 | 127 | 11.8 | 25 | 0 | 22.3 | 2 |
Fibrobacteres | 3 | 5 | 40.0 | 1 | 0 | 33.3 | - |
Acidobacteria | 11 | 11 | 0.0 | 3 | 0 | 27.3 | - |
Bacteroidetes | 767 | 914 | 16.1 | 131 | 9 | 17.1 | 134 |
Fusobacteria | 38 | 47 | 19.1 | 12 | 0 | 31.6 | 7 |
Verrucomicrobia | 35 | 35 | 0.0 | 6 | 2 | 17.1 | 3 |
Gemmatimonadetes | 1 | 1 | 0.0 | 1 | 0 | 100.0 | - |
Dictyoglomi | 2 | 3 | 33.3 | 2 | 0 | 100.0 | - |
Lentisphaerae | 2 | 2 | 0.0 | 1 | 0 | 50.0 | - |
Synergistetes | 17 | 18 | 5.6 | 10 | 1 | 58.8 | 1 |
Caldiserica | 1 | 1 | 0.0 | 1 | 0 | 100.0 | - |
Elusimicrobia | 1 | 1 | 0.0 | 1 | 0 | 100.0 | - |
Total | 9,786 | 11,772 | 16.8 | 1,316 | 74 | 14.2 | 1,000 |