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Table 1. Classification and general features of strain HIMB11 according to the MIGS recommendations [29].

From: Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [30]

 

Phylum Proteobacteria

TAS [31]

 

Class Alphaproteobacteria

TAS [32,33]

 

Order Rhodobacterales

TAS [32,34]

 

Family Rhodobacteraceae

TAS [32,35]

 

Genus not assigned

 
 

Species not assigned

 
 

Strain HIMB11

 
 

Gram stain

Negative

NAS

 

Cell shape

Short irregular rods

IDA

 

Motility

Flagella

NAS

 

Sporulation

Non-sporulating

NAS

 

Temperature range

Mesophile

IDA

 

Optimum temperature

Unknown

 
 

Carbon source

Ambient seawater DOC

TAS [36]

 

Energy source

Mixotrophic

NAS

 

Terminal electron receptor

  

MIGS-6

Habitat

Seawater

IDA

MIGS-6.3

Salinity

~35.0‰

IDA

MIGS-22

Oxygen

Aerobic

NAS

MIGS-15

Biotic relationship

Free-living

TAS [36]

MIGS-14

Pathogenicity

None

NAS

MIGS-4

Geographic location

Kaneohe Bay, Hawaii

TAS [14]

MIGS-5

Sample collection time

18 May, 2005

TAS [14]

MIGS-4.1

Latitude - Longitude

21.44, −157.78

TAS [14]

MIGS-4.2

   

MIGS-4.3

Depth

~1 m

TAS [14]

MIGS-4.4

Altitude

  
  1. a) Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [37].