Table 5. Number of protein coding genes of Ensifer meliloti strain RRI128 associated with the general COG functional categories
From: Genome sequence of the Medicago-nodulating Ensifer meliloti commercial inoculant strain RRI128
Code | Value | %age | COG Category |
|---|---|---|---|
J | 202 | 3.41 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 520 | 8.78 | Transcription |
L | 272 | 4.59 | Replication, recombination and repair |
B | 2 | 0.03 | Chromatin structure and dynamics |
D | 47 | 0.79 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 61 | 1.03 | Defense mechanisms |
T | 237 | 4.00 | Signal transduction mechanisms |
M | 294 | 4.97 | Cell wall/membrane biogenesis |
N | 75 | 1.27 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 1 | 0.02 | Extracellular structures |
U | 116 | 1.96 | Intracellular trafficking and secretion |
O | 186 | 3.14 | Posttranslational modification, protein turnover, chaperones |
C | 355 | 6.00 | Energy production conversion |
G | 594 | 10.03 | Carbohydrate transport and metabolism |
E | 673 | 11.37 | Amino acid transport metabolism |
F | 108 | 1.82 | Nucleotide transport and metabolism |
H | 197 | 3.33 | Coenzyme transport and metabolism |
I | 216 | 3.65 | Lipid transport and metabolism |
P | 306 | 5.17 | Inorganic ion transport and metabolism |
Q | 168 | 2.84 | Secondary metabolite biosynthesis, transport and catabolism |
R | 705 | 11.91 | General function prediction only |
S | 585 | 9.88 | Function unknown |
- | 1,456 | 21.51 | Not in COGS |