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Table 1. Classification and general features of D. nigrificans DSM 574 according to the MIGS recommendations [10]

From: Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [11]

 

Phylum Firmicutes

TAS [12–14]

 

Class Clostridia

TAS [15,16]

 

Order Clostridiales

TAS [17,18]

 

Family Peptococcaceae

TAS [17,19]

 

Genus Desulfotomaculum

TAS [17,20,21]

 

Species Desulfotomaculum nigrificans

TAS [17,20]

 

Type strain Delft 74

TAS [12–14]

 

Gram stain

negative, with a Gram-positive cell wall structure

 
 

Cell shape

rods, rounded ends, sometimes paired

TAS [1]

 

Motility

Slight tumbling, peritrichous flagella

TAS [1]

 

Sporulation

oval, terminal or subterminal, slightly swelling the cell

TAS [1]

 

Temperature range

30–70 °C

TAS [1]

 

Optimum temperature

55 °C

TAS [1]

 

Carbon source

glucose and other carbohydrates

TAS [1,4,5]

 

Energy source

heterotrophic

TAS [1,4,5]

 

Electron acceptor

sulfate, thiosulfate and sulfite.

TAS [4]

MIGS-6

Habitat

soils, compost heaps, thermal spring water, spoiled foods.

TAS [1]

MIGS-6.3

Salinity

not reported

 

MIGS-22

Oxygen

obligate anaerobic

TAS [1]

MIGS-15

Biotic relationship

free living

TAS [1]

MIGS-14

Pathogenicity

none

TAS [1]

MIGS-4

Geographic location

Delft, The Netherlands

 

MIGS-5

Sample collection time

  

MIGS-4.1

Latitude

52.011

 

MIGS-4.2

Longitude

4.360

 

MIGS-4.3

Depth

not reported

 
  1. Evidence codes - TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [22].