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Table 4. Genome statistics

From: Genomic analysis of Agrobacterium radiobacter DSM 30147T and emended description of A. radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980) emend. Sawada et al. 1993

Attribute

Value

% of Total

Genome size (bp)

7,177,085

100

Number of contigs

612

 

Contig N50

24,130

 

Number of replicons

2

 

Extrachromosomal elements

Unknown

 

Total genes

7,151

100

Protein-coding genes

6,834

95.57

Pseudo genes

276

3.86

RNA genes

41

0.57

rRNAs

4

 

Frameshifted genes

95

 

DNA coding region (bp)

6,197,065

86.34

Protein-coding genes with function prediction

5,320

77.85

Protein-coding genes assigned to COGs

5,333

78.04

Protein-coding genes with conserved domain

5,986

87.59

Protein-coding genes with transmembrane helices

1,899

27.79

Protein-coding genes with signal peptides

550

8.05