Table 4. Genome statistics.
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 5,503,984 | 100 |
DNA coding (bp) | 4,759,459 | 86.5 |
DNA G+C (bp) | 3,301,098 | 60.0 |
DNA scaffolds | 6 | 100 |
Total genes | 4,757 | 100 |
Protein coding genes | 4,705 | 98.9 |
RNA genes | 52 | 1.1 |
Pseudo genes | 163 | 3.4 |
Genes in internal clusters | 2,395 | 50.4 |
Genes with function prediction | 2,936 | 61.7 |
Genes assigned to COGs | 3,259 | 68.5 |
Genes with Pfam domains | 3,504 | 73.6 |
Genes with signal peptides | 652 | 13.7 |
Genes with transmembrane helices | 1,108 | 23.3 |
CRISPR repeats | 0 | - |