Table 4. Number of protein coding genes of Mesorhizobium opportunistum WSM2075T associated with the general COG functional categories.
From: Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075T
Code | Value | %age | Description |
|---|---|---|---|
J | 194 | 3.26 | Translation, ribosomal structure and biogenesis |
A | 0 | 0 | RNA processing and modification |
K | 515 | 8.65 | Transcription |
L | 185 | 3.11 | Replication, recombination and repair |
B | 5 | 0.08 | Chromatin structure and dynamics |
D | 37 | 0.62 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0 | Nuclear structure |
V | 63 | 1.06 | Defense mechanisms |
T | 227 | 3.81 | Signal transduction mechanisms |
M | 315 | 5.29 | Cell wall/membrane biogenesis |
N | 50 | 0.84 | Cell motility |
Z | 1 | 0.02 | Cytoskeleton |
W | 1 | 0.02 | Extracellular structures |
U | 131 | 2.2 | Intracellular trafficking and secretion |
O | 208 | 3.5 | Posttranslational modification, protein turnover, chaperones |
C | 353 | 5.93 | Energy production conversion |
G | 592 | 9.95 | Carbohydrate transport and metabolism |
E | 710 | 11.93 | Amino acid transport metabolism |
F | 93 | 1.56 | Nucleotide transport and metabolism |
H | 217 | 3.65 | Coenzyme transport and metabolism |
I | 242 | 4.07 | Lipid transport and metabolism |
P | 250 | 4.2 | Inorganic ion transport and metabolism |
Q | 191 | 3.21 | Secondary metabolite biosynthesis, transport and catabolism |
R | 777 | 13.06 | General function prediction only |
S | 594 | 9.98 | Function unknown |
- | 1394 | 20.66 | Not in COGS |
Total | 5,951 |