Table 4. Number of protein coding genes of Bradyrhizobium sp. WSM1417 associated with the general COG functional categories.
From: Genome sequence of the lupin-nodulating Bradyrhizobium sp. strain WSM1417
Code | Value | %age | COG Category |
|---|---|---|---|
J | 202 | 3.15 | Translation, ribosomal structure and biogenesis |
A | 3 | 0.05 | RNA processing and modification |
K | 430 | 6.71 | Transcription |
L | 283 | 4.42 | Replication, recombination and repair |
B | 2 | 0.03 | Chromatin structure and dynamics |
D | 37 | 0.58 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 90 | 1.40 | Defense mechanisms |
T | 354 | 5.53 | Signal transduction mechanisms |
M | 315 | 4.92 | Cell wall/membrane biogenesis |
N | 130 | 2.03 | Cell motility |
Z | 1 | 0.02 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 138 | 2.15 | Intracellular trafficking and secretion |
O | 210 | 3.28 | Posttranslational modification, protein turnover, chaperones |
C | 417 | 6.51 | Energy production conversion |
G | 431 | 6.73 | Carbohydrate transport and metabolism |
E | 678 | 10.58 | Amino acid transport metabolism |
F | 90 | 1.40 | Nucleotide transport and metabolism |
H | 235 | 3.67 | Coenzyme transport and metabolism |
I | 332 | 5.18 | Lipid transport and metabolism |
P | 331 | 5.17 | Inorganic ion transport and metabolism |
Q | 244 | 3.81 | Secondary metabolite biosynthesis, transport and catabolism |
R | 793 | 12.38 | General function prediction only |
S | 660 | 10.30 | Function unknown |
- | 2,068 | 26.61 | Not in COGS |