Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 170 | 4.87 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 274 | 7.85 | Transcription |
L | 137 | 3.92 | Replication, recombination and repair |
B | 3 | 0.09 | Chromatin structure and dynamics |
D | 29 | 0.83 | Cell cycle control, cell division, chromosome partitioning |
Y | n. a. | n. a. | Nuclear structure |
V | 45 | 1.29 | Defense mechanisms |
T | 156 | 4.47 | Signal transduction mechanisms |
M | 199 | 5.70 | Cell wall/membrane biogenesis |
N | 52 | 1.49 | Cell motility |
Z | n. a. | n. a. | Cytoskeleton |
W | n. a. | n. a. | Extracellular structures |
U | 60 | 1.72 | Intracellular trafficking and secretion, and vesicular transport |
O | 127 | 3.64 | Posttranslational modification, protein turnover, chaperones |
C | 204 | 5.84 | Energy production and conversion |
G | 197 | 5.64 | Carbohydrate transport and metabolism |
E | 425 | 12.17 | Amino acid transport and metabolism |
F | 79 | 2.26 | Nucleotide transport and metabolism |
H | 152 | 4.35 | Coenzyme transport and metabolism |
I | 146 | 4.18 | Lipid transport and metabolism |
P | 174 | 4.98 | Inorganic ion transport and metabolism |
Q | 110 | 3.15 | Secondary metabolites biosynthesis, transport and catabolism |
R | 446 | 12.77 | General function prediction only |
S | 306 | 8.76 | Function unknown |
- | 808 | 20.27 | Not in COGs |