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Table 3. Nucleotide content and gene count levels of the genome

From: Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production

Attribute

Value

% of totala

Genome size (bp)

4,672,040

100.00

DNA coding region (bp)

4220,082

90.33

DNA G+C content (bp)

2,616273

56.01

Total genes

4,532

100.00

RNA genes

179

3.95

Protein-coding genes

4,393

96.05

Genes in paralog clusters

1,665

36.74

Genes assigned to COGs

3,780

83.41

Genes assigned Pfam domains

3,949

87.14

Genes assigned TIGRfam domains

1,715

37.84

Genes with signal peptides

1,603

35.37

Genes with transmembrane helices

1,101

24.29

Pseudo Genesb

43

0.95

  1. a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.
  2. b) Pseudogenes may also be counted as protein coding or RNA genes, so is not additive under total gene count.