Table 3. Genome Statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,603,458 | 100.00% |
DNA coding region (bp) | 3,189,580 | 88.51% |
DNA G+C content (bp) | 2,284,441 | 63.40% |
Number of replicons | 1 | |
Extrachromosomal elements | 0 | |
Total genes | 3,288 | 100.00% |
RNA genes | 88 | 2.68% |
rRNA operons | 4 | |
tRNA genes | 73 | 2.22% |
Protein-coding genes | 3,200 | 97.32% |
Pseudo genes | 99 | 3.01% |
Genes with function prediction (proteins) | 2,616 | 79.56% |
Genes in paralog clusters | 1,350 | 41.06% |
Genes assigned to COGs | 2,610 | 79.38% |
Genes assigned Pfam domains | 2,724 | 82.85% |
Genes with signal peptides | 313 | 9.52% |
Genes with transmembrane helices | 722 | 21.96% |
CRISPR repeats | 1 |