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Table 5. Number of genes associated with the 25 general COG functional categories

From: Non-contiguous finished genome sequence and description of Oceanobacillus massiliensis sp. nov.

Code Value %age Description
J 170 4.83 Translation
A 0 0 RNA processing and modification
K 232 6.59 Transcription
L 184 5.23 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 37 1.05 Cell cycle control, mitosis and meiosis
Y 0 0 Nuclear structure
V 48 1.36 Defense mechanisms
T 142 4.04 Signal transduction mechanisms
M 156 4.43 Cell wall/membrane biogenesis
N 64 1.82 Cell motility
Z 0 0 Cytoskeleton
W 0 0 Extracellular structures
U 52 1.48 Intracellular trafficking and secretion
O 104 2.96 Posttranslational modification, protein turnover, chaperones
C 149 4.23 Energy production and conversion
G 194 5.51 Carbohydrate transport and metabolism
E 283 8.04 Amino acid transport and metabolism
F 84 2.39 Nucleotide transport and metabolism
H 100 2.84 Coenzyme transport and metabolism
I 84 2.39 Lipid transport and metabolism
P 224 6.37 Inorganic ion transport and metabolism
Q 54 1.53 Secondary metabolites biosynthesis, transport and catabolism
R 424 12.05 General function prediction only
S 281 7.99 Function unknown
X 846 24.04 Not in COGs
  1. a) The total is based on the total number of protein coding genes in the annotated genome.