Table 5. Number of genes associated with the 25 general COG functional categories
From: Non-contiguous finished genome sequence and description of Oceanobacillus massiliensis sp. nov.
Code | Value | %age | Description |
|---|---|---|---|
J | 170 | 4.83 | Translation |
A | 0 | 0 | RNA processing and modification |
K | 232 | 6.59 | Transcription |
L | 184 | 5.23 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 37 | 1.05 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0 | Nuclear structure |
V | 48 | 1.36 | Defense mechanisms |
T | 142 | 4.04 | Signal transduction mechanisms |
M | 156 | 4.43 | Cell wall/membrane biogenesis |
N | 64 | 1.82 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 52 | 1.48 | Intracellular trafficking and secretion |
O | 104 | 2.96 | Posttranslational modification, protein turnover, chaperones |
C | 149 | 4.23 | Energy production and conversion |
G | 194 | 5.51 | Carbohydrate transport and metabolism |
E | 283 | 8.04 | Amino acid transport and metabolism |
F | 84 | 2.39 | Nucleotide transport and metabolism |
H | 100 | 2.84 | Coenzyme transport and metabolism |
I | 84 | 2.39 | Lipid transport and metabolism |
P | 224 | 6.37 | Inorganic ion transport and metabolism |
Q | 54 | 1.53 | Secondary metabolites biosynthesis, transport and catabolism |
R | 424 | 12.05 | General function prediction only |
S | 281 | 7.99 | Function unknown |
X | 846 | 24.04 | Not in COGs |