Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 184 | 4.3 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 512 | 11.8 | Transcription |
L | 182 | 4.2 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 34 | 0.8 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 79 | 1.8 | Defense mechanisms |
T | 209 | 4.8 | Signal transduction mechanisms |
M | 174 | 4.0 | Cell wall/membrane biogenesis |
N | 5 | 0.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 35 | 0.8 | Intracellular trafficking and secretion, and vesicular transport |
O | 130 | 3.0 | Post-translational modification, protein turnover, chaperones |
C | 274 | 6.3 | Energy production and conversion |
G | 327 | 7.6 | Carbohydrate transport and metabolism |
E | 341 | 7.9 | Amino acid transport and metabolism |
F | 96 | 2.2 | Nucleotide transport and metabolism |
H | 202 | 4.7 | Coenzyme transport and metabolism |
I | 213 | 4.9 | Lipid transport and metabolism |
P | 210 | 4.9 | Inorganic ion transport and metabolism |
Q | 196 | 4.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 588 | 13.6 | General function prediction only |
S | 330 | 7.6 | Function unknown |
- | 1,362 | 26.2 | Not in COGs |