Table 4. Number of genes associated with the general COG functional categories
From: Genome sequence of the marine bacterium Corynebacterium maris type strain Coryn-1T (= DSM 45190T)
Code | value | %age | Description |
|---|---|---|---|
J | 154 | 5.96 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.04 | RNA processing and modification |
K | 163 | 6.31 | Transcription |
L | 122 | 4.72 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 22 | 0.85 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear structure |
V | 44 | 1.70 | Defense mechanisms |
T | 63 | 2.44 | Signal transduction mechanisms |
M | 116 | 4.49 | Cell wall/membrane biogenesis |
N | 0 | 0.00 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 21 | 0.81 | Intracellular trafficking and secretion, and vesicular transport |
O | 77 | 2.98 | Posttranslational modification, protein turnover, chaperones |
C | 155 | 6.00 | Energy production and conversion |
G | 154 | 5.96 | Carbohydrate transport and metabolism |
E | 230 | 8.90 | Amino acid transport and metabolism |
F | 70 | 2.71 | Nucleotide transport and metabolism |
H | 111 | 4.30 | Coenzyme transport and metabolism |
I | 90 | 3.48 | Lipid transport and metabolism |
P | 185 | 7.16 | Inorganic ion transport and metabolism |
Q | 75 | 2.90 | Secondary metabolites biosynthesis, transport and catabolism |
R | 295 | 11.42 | General function prediction only |
S | 181 | 7.00 | Function unknown |
- | 587 | 22.72 | Not in COGs |