Table 3. Genome Statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 5,344,419 | 100.00 |
DNA coding region (bp) | 4,713,144 | 88.19 |
DNA G+C content (bp) | 3,380,828 | 63.27 |
Number of replicons | 7 | |
Extrachromosomal elements | 6 | |
Total genes | 5,335 | 100.00 |
RNA genes | 108 | 2.02 |
rRNA operons | 4 | |
tRNA genes | 92 | 1.72 |
Protein-coding genes | 5,227 | 97.98 |
Pseudo genes | 81 | 1.52 |
Genes with function prediction | 3,904 | 73.18 |
Genes in paralog clusters | 1,423 | 26.67 |
Genes assigned to COGs | 3,844 | 72.05 |
Genes assigned Pfam domains | 4,091 | 76.68 |
Genes with signal peptides | 1,786 | 33.48 |
Genes with transmembrane helices | 1,047 | 19.63 |
CRISPR repeats | 1 |