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Table 6. Integrated Microbial Genome (IMG) locus tags of L. aquimarina DSM 24565T genes for the initiation of replication, toxin/antitoxin modules and two representatives of type IV secretion systems (T4SS) that are required for conjugation. The locus tags are accentuated in blue1,2,3.

From: Genome sequence of the Leisingera aquimarina type strain (DSM 24565T), a member of the marine Roseobacter clade rich in extrachromosomal elements

 

Replication Initiation

Plasmid Stability

Type IV Secretion

Replicon

Replicase

Locus Tag

Toxin

Antitoxin

VirB4

VirD4

Chromosome

DnaA

Aqui_0952

-

-

Aqui_3705

Aqui_37203

pAqui_A249

RepC-14

Aqui_4671

-

-

Aqui_46852

Aqui_45983

pAqui_B243

RepC-13

Aqui_4931

-

-

-

-

pAqui_C182

RepC-8

Aqui_5105

Aqui_5145

Aqui_5144

-

-

pAqui_D148

RepB-I

Aqui_4343

-

-

-

-

pAqui_E140

RepA-I

Aqui_4076

-

-

-

-

pAqui_F126

DnaA-like I

Aqui_4459

Aqui_4464

Aqui_4465

  

pAqui_G6

RepA-II1

Aqui_5224

Aqui_5228

Aqui_5229

-

-

  1. 1solitary replicase without partitioning module;
  2. 2traC gene of F factor conjugation system;
  3. 3presence of adjacent DNA relaxase VirD2.