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Table 3. Nucleotide and gene count levels of the genome of C. testosteroni KF-1

From: Permanent draft genome sequence of Comamonas testosteroni KF-1

Attribute

Value

% of totala

Genome size (bp)

6,026,527

100

DNA coding region (bp)

5,275,818

87.54

DNA G+C content (bp)

3,723,913

61.79

Number of replicons

1

 

Extrachromosomal elements

0

 

Genes total number

5,606

100

Protein-coding genes

5,492

97.97

RNA genes

114

2.03

rRNA operon count

6

 

Genes with function prediction

4,009

71.51

Genes in paralog clusters

1314

23.44

Genes assigned to COGs

4,131

73.69

Genes assigned to Pfam domains

4,375

78.04

Genes connected to KEGG pathways

1,502

26.79

Genes with transmembrane helices

1,265

22.57

Genes with signal peptides

1,410

25.15

  1. a)The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.