Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Dehalobacter restrictus PER-K23T
Code | Value | %age | Description |
|---|---|---|---|
J | 149 | 6.4 | Translation |
A | — | — | RNA processing and modification |
K | 176 | 7.6 | Transcription |
L | 180 | 7.8 | Replication, recombination and repair |
B | 1 | 0.1 | Chromatin structure and dynamics |
D | 44 | 1.9 | Cell cycle control, cell division, chromosome partitioning |
Y | — | — | Nuclear structure |
V | 39 | 1.7 | Defense mechanisms |
T | 166 | 7.2 | Signal transduction mechanisms |
M | 148 | 6.4 | Cell wall/membrane biogenesis |
N | 71 | 3.1 | Cell motility |
Z | — | — | Cytoskeleton |
W | — | — | Extracellular structures |
U | 73 | 3.1 | Intracellular trafficking and secretion |
O | 84 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 169 | 7.3 | Energy production and conversion |
G | 64 | 2.8 | Carbohydrate transport and metabolism |
E | 166 | 7.2 | Amino acid transport and metabolism |
F | 59 | 2.5 | Nucleotide transport and metabolism |
H | 118 | 5.1 | Coenzyme transport and metabolism |
I | 40 | 1.7 | Lipid transport and metabolism |
P | 105 | 4.5 | Inorganic ion transport and metabolism |
Q | 27 | 1.2 | Secondary metabolites biosynthesis, transport and catabolism |
R | 241 | 10.4 | General function prediction only |
S | 203 | 8.7 | Function unknown |
- | 781 | 26.9a | Not in COGs |