Table 4. Number of genes associated with the 25 general COG functional categories
Code | Value | %agea | Description |
|---|---|---|---|
J | 163 | 3.76 | Translation |
A | 1 | 0.02 | RNA processing and modification |
K | 281 | 6.48 | Transcription |
L | 176 | 4.06 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 32 | 0.74 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 48 | 1.11 | Defense mechanisms |
T | 103 | 2.38 | Signal transduction mechanisms |
M | 235 | 5.42 | Cell wall/membrane biogenesis |
N | 95 | 2.19 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 41 | 0.95 | Intracellular trafficking and secretion |
O | 138 | 3.18 | Posttranslational modification, protein turnover, chaperones |
C | 254 | 5.86 | Energy production and conversion |
G | 343 | 7.91 | Carbohydrate transport and metabolism |
E | 319 | 7.36 | Amino acid transport and metabolism |
F | 77 | 1.78 | Nucleotide transport and metabolism |
H | 131 | 3.02 | Coenzyme transport and metabolism |
I | 89 | 2.05 | Lipid transport and metabolism |
P | 175 | 4.04 | Inorganic ion transport and metabolism |
Q | 47 | 1.08 | Secondary metabolites biosynthesis, transport and catabolism |
R | 318 | 7.34 | General function prediction only |
S | 312 | 7.20 | Function unknown |
- | 957 | 22.08 | Not in COGs |