Table 4. Number of genes associated with the general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 164 | 5.5 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 169 | 5.7 | Transcription |
L | 158 | 5.3 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 34 | 1.2 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 49 | 1.7 | Defense mechanisms |
T | 266 | 9.0 | Signal transduction mechanisms |
M | 222 | 7.5 | Cell wall/membrane/envelope biogenesis |
N | 80 | 2.7 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 70 | 2.4 | Intracellular trafficking, secretion, and vesicular transport |
O | 114 | 3.9 | Posttranslational modification, protein turnover, chaperones |
C | 158 | 5.3 | Energy production and conversion |
G | 123 | 4.2 | Carbohydrate transport and metabolism |
E | 154 | 5.2 | Amino acid transport and metabolism |
F | 73 | 2.5 | Nucleotide transport and metabolism |
H | 117 | 4.0 | Coenzyme transport and metabolism |
I | 146 | 4.9 | Lipid transport and metabolism |
P | 121 | 4.1 | Inorganic ion transport and metabolism |
Q | 55 | 1.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 405 | 13.7 | General function prediction only |
S | 279 | 9.4 | Function unknown |
- | 1,516 | 36.0 | Not in COGs |