Table 5. Number of genes associated with the 25 general COG functional categories
Code | Value | % of total | Description |
|---|---|---|---|
J | 141 | 7.42 | Translation |
A | 0 | 0 | RNA processing and modification |
K | 161 | 8.47 | Transcription |
L | 102 | 5.37 | Replication, recombination and repair |
B | 1 | 0.05 | Chromatin structure and dynamics |
D | 15 | 0.79 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0 | Nuclear structure |
V | 52 | 2.74 | Defense mechanisms |
T | 68 | 3.58 | Signal transduction mechanisms |
M | 90 | 4.73 | Cell wall/membrane biogenesis |
N | 1 | 0.05 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 16 | 0.84 | Intracellular trafficking and secretion |
O | 43 | 2.26 | Posttranslational modification, protein turnover, chaperones |
C | 73 | 3.84 | Energy production and conversion |
G | 160 | 8.42 | Carbohydrate transport and metabolism |
E | 163 | 8.57 | Amino acid transport and metabolism |
F | 52 | 2.74 | Nucleotide transport and metabolism |
H | 40 | 2.10 | Coenzyme transport and metabolism |
I | 38 | 2.00 | Lipid transport and metabolism |
P | 96 | 5.05 | Inorganic ion transport and metabolism |
Q | 20 | 1.05 | Secondary metabolites biosynthesis, transport and catabolism |
R | 225 | 11.84 | General function prediction only |
S | 113 | 5.94 | Function unknown |
- | 415 | 21.83 | Not in COGs |