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Table 6. Overview of taxonomic diversity in metagenomes.

From: Metagenomes of tropical soil-derived anaerobic switchgrass-adapted consortia with and without iron

Domain

Phylum

SG only Count

%

SG + Fe Count

%

Archaea

     
 

Crenarchaeota

575

0.29

88

0.05

 

Euryarchaeota

5,089

2.58

2,590

1.34

 

Nanoarchaeota

1

0

0

0

Bacteria

     
 

Acidobacteria

478

0.24

2,392

1.24

 

Actinobacteria

1,113

0.56

2,756

1.42

 

Aquificae

100

0.05

99

0.05

 

Bacteroidetes

14,680

7.44

14,937

7.72

 

Chlamydiae

16

0.01

35

0.02

 

Chlorobi

460

0.23

530

0.27

 

Chloroflexi

1,073

0.54

2042

1.06

 

Chrysiogenetes

13

0.01

18

0.01

 

Cyanobacteria

742

0.38

823

0.43

 

Deferribacteres

117

0.06

121

0.06

 

Deinococcus-Thermus

158

0.08

275

0.14

 

Dictyoglomi

132

0.07

144

0.07

 

Elusimicrobia

17

0.01

35

0.02

 

Fibrobacteres

30

0.02

36

0.02

 

Firmicutes

38,958

19.75

44,858

23.18

 

Fusobacteria

533

0.27

534

0.28

 

Gemmatimonadetes

11

0.01

29

0.01

 

Lentisphaerae

113

0.06

165

0.09

 

Nitrospirae

70

0.04

80

0.04

 

Planctomycetes

375

0.19

448

0.23

 

Proteobacteria

11,289

5.72

11,803

6.1

 

Spirochaetes

2,460

1.25

3,795

1.96

 

Synergistetes

314

0.16

460

0.24

 

Tenericutes

30

0.02

34

0.02

 

Thermodesulfobacteria

36

0.02

43

0.02

 

Thermotogae

330

0.17

414

0.21

 

Verrucomicrobia

450

0.23

611

0.32

Eukaryota

     
 

Apicomplexa

25

0.01

19

0.01

 

Arthropoda

32

0.02

30

0.02

 

Ascomycota

64

0.03

59

0.03

 

Bacillariophyta

7

0

8

0

 

Basidiomycota

8

0

5

0

 

Chlorophyta

5

0

5

0

 

Chordata

32

0.02

29

0.01

 

Microsporidia

1

0

0

0

 

Nematoda

7

0

3

0

 

Streptophyta

73

0.04

66

0.03

Plasmid:Archaea

     
 

Crenarchaeota

5

0

2

0

 

Euryarchaeota

4

0

4

0

Plasmid:Bacteria

     
 

Actinobacteria

3

0

3

0

 

Bacteroidetes

2

0

1

0

 

Firmicutes

23

0.01

32

0.02

 

Proteobacteria

32

0.02

29

0.01

Viruses

     
 

ds DNA viruses, no RNA stage

113

0.06

97

0.05

 

ss DNA viruses

1

0

0

0