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Table 3. Genome statistics

From: Complete genome sequence of the motile actinomycete Actinoplanes missouriensis 431T (= NBRC 102363T)

Attribute

Value

% of totala

Genome size (bp)

8,773,466

100.00%

Coding region (bp)

7,964,669

90.78%

G+C content (bp)

6,213,639

70.82%

Total genes

8,204

n/a

RNA genes

79

n/a

rRNA operon

6

n/a

tRNA (44 species)

58

n/a

tmRNA

1

n/a

4.5S RNA

1

n/a

rnpB (RNase P component)

1

n/a

Protein-coding genes

8,125

100.00%

Genes in paralog clusters

3,123

38.44%

Genes assigned to COGs

5,171

63.64%

Genes assigned Pfam domains

5,463

67.24%

Genes with signal peptidesb

799

9.83%

Genes with transmembrane helices

2,122

26.12%

  1. a) The total is based on either the size of the genome in base pairs or the total number of protein-coding genes in the annotated genome.
  2. b) Predicted by SignalP 4.0.
  3. n/a, not available