Table 3. Genome statistics
From: Complete genome sequence of Halorhabdus utahensis type strain (AX-2T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,116,795 | 100.00% |
DNA Coding region (bp) | 2,768,833 | 88.83% |
DNA G+C content (bp) | 1,960,463 | 62.90% |
Number of replicons | 1 | |
Extrachromosomal elements | 0 | |
Total genes | 3,075 | 100.00% |
RNA genes | 48 | 1.59% |
rRNA operons | 1 | |
Protein-coding genes | 3,027 | 98.30% |
Pseudo genes | 29 | 1.90% |
Genes with function prediction | 1,860 | 60.47% |
Genes in paralog clusters | 473 | 15.38% |
Genes assigned to COGs | 1,946 | 63.28% |
Genes assigned Pfam domains | 1,918 | 62.37% |
Genes with signal peptides | 705 | 22.93% |
Genes with transmembrane helices | 782 | 25.43% |
CRISPR repeats | 2 |