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Table 3. Genome Statistics

From: Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema

Attribute Value % of Total
Genome size (bp) 3,239,340 100.00%
DNA coding region (bp) 2,965,950 91.56%
DNA G+C content (bp) 1,476,358 45.58%
Number of replicons 1  
Extrachromosomal elements 0  
Total genes 2,928 100.00%
RNA genes 59 2.02%
rRNA operons 3  
Protein-coding genes 2,869 97.98%
Pseudo genes 80 2.73%
Genes with function prediction 2,078 70.97%
Genes in paralog clusters 1,319 45.05%
Genes assigned to COGs 2,270 77.53%
Genes assigned Pfam domains 2,260 77.19%
Genes with signal peptides 527 18.00%
Genes with transmembrane helices 762 26.02%
CRISPR repeats 0