Table 2. Genome sequencing project information
From: Complete genome sequence of Atopobium parvulum type strain (IPP 1246T)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Two Sanger libraries: 8kb pMCL200 and fosmid pcc1Fos One 454 pyrosequence standard library |
MIGS-29 | Sequencing platforms | ABI3730, 454 GS FLX |
MIGS-31.2 | Sequencing coverage | 7.8× Sanger; 43.4× pyrosequence |
MIGS-30 | Assemblers | Newbler, phrap |
MIGS-32 | Gene calling method | Prodigal, GenePRIMP |
Genbank ID | CP001721 | |
Genbank Date of Release | September 9, 2009 | |
GOLD ID | Gc01099 | |
NCBI project ID | 29401 | |
Database: IMG-GEBA | 2501533209 | |
MIGS-13 | Source material identifier | DSM 20469 |
Project relevance | Tree of Life, GEBA |