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Table 5. Vibriophage VvAW1 gene annotations*.

From: Complete genome sequence of bacteriophage VvAW1, which infects Vibrio vulnificus

Gene

Strand

Function or Similarity

Evidence or Organism

Accession Num.

% Id

E-Value

1

-

DNA methylase

COG4646

COG4646

24

8.0e−65

2

-

hypothetical protein

Thalassomonas phage Ba3

NC_009990

43

2.0e−63

3

-

phage DNA transfer protein

Xyella fastidiosa M12

CP000941

35

1.0e−19

4

-

hypothetical phage protein

PHA00672

cl10253

nr

2.4e−42

5

-

hypothetical protein

none

n/a

n/a

n/a

6

-

phage tail collar protein

pfam07484

n/a

nr

1.5e−05

7

-

phage stabilization prot., gp 10

Xyella phage Xfas53

GQ421471

36

1.0e−25

8

-

hypothetical protein

Thalassomonas phage Ba3

NC_009990

34

2.0e−25

9

-

hypothetical protein

Thalassomonas phage Ba3

NC_009990

52

4.0e−06

10

-

P22 coat protein, gp5

pfam11651

cl0373

nr

1.3e−82

11

-

scaffold protein

EBPR podovirus

AE170876

36

4.0e−30

12

-

portal protein

EBPR podovirus

AE170876

38

1.0e−127

13

-

terminase large subunit

Shigella phage Shfl1

NC_015456

39

0.0e+00

14

-

terminase, small subunit

pfam03592

cl01513

nr

4.0e−09

15

-

hypothetical phage protein

PHA000821

cl10282

nr

5.8e−10

16

-

holin protein

Psychrobacter phage psymv2

AEO01029

46

1.0e−13

17

-

hypothetical protein

Acinetobacter phage AB1

ADO14413

48

4.0e−21

18

-

hypothetical protein

Vibrio sp. AND4

ZP_02196938

32

3.0e−12

19

-

endolysin

Bacteriophage P27

103807.1

37

2.0e−11

20

-

hypothetical protein

none

n/a

n/a

n/a

21

-

ssDNA binding protein

COG0629

COG0629

43

4.0e−36

22

-

hypothetical protein

none

n/a

n/a

n/a

23

-

con. protein, unknown func.

DUF2303

cl02338

nr

5.1e−86

24

-

hypothetical protein

CPS-53 prophage

AEQ15784

47

3.0e−27

25

-

hypothetical protein

Pseudomonas phage D3

NP_061574

34

3.0e−19

26

-

RNA-binding regulator protein

COG1551

COG1551

43

6.0e−10

27

-

exonuclease

pfam00929

cl0219

nr

1.1e−17

28

-

hypothetical protein

Pseudomonas phage F116

AY625898

40

0.0e+00

29

-

hypothetical protein

Pseudomonas phage F116

AY625898

43

0.0e+00

30

-

hypothetical protein

Pectobacteria phage ZF40

AFC22460.1

35

4.0e−05

31

-

hypothetical protein

none

n/a

n/a

n/a

32

+

lambda-like repressor, HTH mot.

SSF47413

IPR010982

nr

1.6e−07

33

+

hypothetical protein

Thalassomonas phage Ba3

NC_009990

46

3.0e−19

34

+

con. protein, unknown func.

DUF3268

cl13172

nr

1.7e−29

35

+

hypothetical protein

Vibrio cholerae MZO-3

ZP_01955042

40

1.0e−47

36

+

hypothetical protein

Opitutacecae sp. TAV5

ZP_09596846

50

1.0e−27

37

+

con. protein, unknown func.

DUF1367

cl06231

nr

1.7e−51

38

+

con. protein, unknown func.

DUF1364

cl06229

nr

5.1e−38

39

-

hypothetical protein

Roseobacter denitrificans

YP_771820

29

4.0e−09

40

-

cellulosome enzyme

Acinetobacter baumanni

ZP_05829744

36

1.0e−92

  1. *Genes are listed by number, along with their predicted function, if known, followed by the nature of the evidence (e.g., COG group) that supports the functional classification. Genes with no functional prediction, but with significant (E < 10−5) sequence similarity to genes in the NCBI database as determined by blastp, are listed, followed by the name of the organism in which the similar gene was found.