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Table 3. Genome Statistics

From: Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1)

Attribute Value % of Total
Genome size (bp) 4,495,250 100.00%
DNA coding region (bp) 3,693,336 82.16%
DNA G+C content (bp) 2,067,067 46.06%
Number of scaffolds 5*  
Extrachromosomal elements 1  
Total genes 3,598 100.00%
RNA genes 62 1.72%
rRNA operons 3**  
tRNA genes 48 1.33%
Protein-coding genes 3,536 98.28%
Pseudo genes 70 1.95%
Genes with function prediction (proteins) 2,064 57.37%
Genes in paralog clusters 1,575 43.77%
Genes assigned to COGs 2,064 57.37%
Genes assigned Pfam domains 2,072 57.59%
Genes with signal peptides 1,109 30.82%
Genes with transmembrane helices 687 19.09%
CRISPR repeats 5  
  1. * four scaffolds for the chromosome and one for a plasmid
  2. ** only two rRNA operons appear to be complete; the third copy appears to be split into two incomplete fractions due to unresolved assembly problems.