Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 143 | 8.5 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 118 | 7.0 | Transcription |
L | 99 | 5.9 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 58 | 3.5 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 25 | 1.5 | Defense mechanisms |
T | 59 | 3.5 | Signal transduction mechanisms |
M | 46 | 2.7 | Cell wall/membrane/envelope biogenesis |
N | 2 | 0.1 | Cell motility |
Z | 39 | 2.4 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 19 | 1.1 | Intracellular trafficking, secretion, and vesicular transport |
O | 54 | 3.2 | Posttranslational modification, protein turnover, chaperones |
C | 77 | 4.6 | Energy production and conversion |
G | 260 | 15.5 | Carbohydrate transport and metabolism |
E | 160 | 9.5 | Amino acid transport and metabolism |
F | 58 | 3.6 | Nucleotide transport and metabolism |
H | 42 | 2.5 | Coenzyme transport and metabolism |
I | 44 | 2.6 | Lipid transport and metabolism |
P | 58 | 3.6 | Inorganic ion transport and metabolism |
Q | 15 | 0.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 193 | 11.5 | General function prediction only |
S | 109 | 6.5 | Function unknown |
- | 396 | 20.6 | Not in COGs |