Table 2. Genome sequencing project information
From: Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4T)
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Improved high quality draft |
MIGS-28 | Libraries used | Four genomic libraries: two 454 pyrosequence standard libraries, one 454 PE library (11.5 kb insert size), one Illumina library |
MIGS-29 | Sequencing platforms | Illumina GAii, 454 GS FLX Titanium |
MIGS-31.2 | Sequencing coverage | 2,172.4 Ă— Illumina; 20.0 Ă— pyrosequence |
MIGS-30 | Assemblers | Newbler version 2.3, Velvet version 1.0.13, phrap version SPS - 4.24 |
MIGS-32 | Gene calling method | Prodigal |
| Â | INSDC ID | AGSB00000000 |
| Â | GenBank Date of Release | January 12, 2012 |
| Â | GOLD ID | Gi05348 |
| Â | NCBI project ID | 53485 |
| Â | Database: IMG-GEBA | 2509601028 |
MIGS-13 | Source material identifier | DSM 6591 |
| Â | Project relevance | Tree of Life, GEBA, Bioremediation |