Table 4. Number of genes associated with the general COG functional categories
Code | value | % agea | Description |
|---|---|---|---|
J | 149 | 4.1 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 188 | 5.2 | Transcription |
L | 269 | 7.4 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 26 | 0.7 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 34 | 0.9 | Defense mechanisms |
T | 111 | 3.1 | Signal transduction mechanisms |
M | 149 | 4.1 | Cell wall/membrane/envelope biogenesis |
N | 47 | 1.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 62 | 1.7 | Intracellular trafficking, secretion, and vesicular transport |
O | 129 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 244 | 6.7 | Energy production and conversion |
G | 215 | 5.9 | Carbohydrate transport and metabolism |
E | 257 | 7.1 | Amino acid transport and metabolism |
F | 89 | 2.5 | Nucleotide transport and metabolism |
H | 153 | 4.2 | Coenzyme transport and metabolism |
I | 130 | 3.6 | Lipid transport and metabolism |
P | 121 | 3.3 | Inorganic ion transport and metabolism |
Q | 81 | 2.2 | Secondary metabolites biosynthesis, transport and catabolism |
R | 326 | 9.0 | General function prediction only |
S | 239 | 6.6 | Function unknown |
- | 886 | 24.4 | Not in COGs |