Table 3. Genome Statistics
Attribute | Value | % of Totala |
|---|---|---|
Genome size (bp) | 3,557,831 | 100.00% |
DNA coding region (bp) | 3,106,298 | 87.31% |
DNA G+C content (bp) | 2,019,235 | 56.75% |
Number of replicons | 2 | |
Extrachromosomal elements | 1 | |
Total genes | 3,695 | |
RNA genes | 69 | |
rRNA operons | 5 | |
Protein-coding genes | 3,626 | 100.00% |
Pseudo genes | 155 | 4.27% |
Genes with function prediction | 2,475 | 68.26% |
Genes in paralog clusters | 1,896 | 52.29% |
Genes assigned to COGs | 2,740 | 75.57% |
Genes assigned Pfam domains | 413 | 11.39% |
Genes with signal peptides | 652 | 17.98% |
Genes with transmembrane helices | 910 | 25.10% |
CRISPR repeats | 2 |