Table 2. Genome sequencing project information
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | Four genomic libraries: one 454 pyrosequence standard library, two 454 PE libraries (6 kb and 10 kb insert size), one Illumina library |
MIGS-29 | Sequencing platforms | Illumina GAii, 454 GS FLX Titanium |
MIGS-31.2 | Sequencing coverage | 168.4 × Illumina; 51.2 × pyrosequence |
MIGS-30 | Assemblers | Newbler version 2.3-PreRelease-6/30/2009, Velvet 1.0.13, phrap version SPS - 4.24 |
MIGS-32 | Gene calling method | Prodigal 1.4, GenePRIMP |
INSDC ID | CP003179 (chromosome) | |
CP003180 (plasmid, unnamed) | ||
Genbank Date of Release | December 14, 2011 | |
GOLD ID | Gc02053 | |
NCBI project ID | 40777 | |
Database: IMG-GEBA | 2506520015 | |
MIGS-13 | Source material identifier | DSM 10332 |
Project relevance | Tree of Life, GEBA, biomining |