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Table 3. Genome Statistics

From: Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)

Attribute Value % of Total
Genome size (bp) 1,999,646 100.00%
DNA coding region (bp) 1,838,210 91.93%
DNA G+C content (bp) 941,059 47.06%
Number of replicons 2  
Extrachromosomal elements 1  
Total genes 1,973 100.00%
RNA genes 59 2.99%
rRNA operons 3  
tRNA genes 47 2.38%
Protein-coding genes 1,914 97.01%
Pseudo genes 38 1.93%
Genes with function prediction (proteins) 1,558 78.97%
Genes in paralog clusters 833 42.22%
Genes assigned to COGs 1,685 85.40%
Genes assigned Pfam domains 1,695 85.91%
Genes with signal peptides 285 14.45%
Genes with transmembrane helices 486 24.63%
CRISPR repeats 0