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Table 3. Genome Statistics

From: Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)

Attribute

Value

% of Total

Genome size (bp)

1,999,646

100.00%

DNA coding region (bp)

1,838,210

91.93%

DNA G+C content (bp)

941,059

47.06%

Number of replicons

2

 

Extrachromosomal elements

1

 

Total genes

1,973

100.00%

RNA genes

59

2.99%

rRNA operons

3

 

tRNA genes

47

2.38%

Protein-coding genes

1,914

97.01%

Pseudo genes

38

1.93%

Genes with function prediction (proteins)

1,558

78.97%

Genes in paralog clusters

833

42.22%

Genes assigned to COGs

1,685

85.40%

Genes assigned Pfam domains

1,695

85.91%

Genes with signal peptides

285

14.45%

Genes with transmembrane helices

486

24.63%

CRISPR repeats

0