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Table 3. Genome Statistics

From: Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812T)

Attribute

Value

% of Totala

Genome size (bp)

2,322,224

100.00%

DNA coding region (bp)

2,101,503

90.50%

DNA G+C content (bp)

985,214

42.43%

Number of replicons

1

 

Extrachromosomal elements

0

 

Total genes

2,291

 

RNA genes

58

 

rRNA operons

2

 

tRNA genes

49

 

Protein-coding genes

2,233

100.00%

Pseudo genes

38

1.70%

Genes with function prediction (proteins)

1,678

75.15%

Genes in paralog clusters

959

42.95%

Genes assigned to COGs

1,845

82.62%

Genes assigned Pfam domains

917

41.07%

Genes with signal peptides

351

15.72%

Genes with transmembrane helices

499

22.35%

CRISPR repeats

3

 
  1. a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.