Table 4. Number of genes associated with the general COG functional categories
From: Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128T)
Code | value | %age | Description |
|---|---|---|---|
J | 171 | 4.6 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 394 | 10.6 | Transcription |
L | 175 | 4.7 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 35 | 0.9 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 58 | 1.6 | Defense mechanisms |
T | 190 | 5.1 | Signal transduction mechanisms |
M | 156 | 4.2 | Cell wall/membrane biogenesis |
N | 6 | 0.2 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 36 | 1.0 | Intracellular trafficking and secretion, and vesicular transport |
O | 134 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 245 | 6.6 | Energy production and conversion |
G | 259 | 7.0 | Carbohydrate transport and metabolism |
E | 313 | 8.4 | Amino acid transport and metabolism |
F | 91 | 2.4 | Nucleotide transport and metabolism |
H | 194 | 5.2 | Coenzyme transport and metabolism |
I | 179 | 4.8 | Lipid transport and metabolism |
P | 176 | 4.7 | Inorganic ion transport and metabolism |
Q | 152 | 4.1 | Secondary metabolites biosynthesis, transport and catabolism |
R | 478 | 12.8 | General function prediction only |
S | 282 | 7.6 | Function unknown |
- | 1,218 | 26.9 | Not in COGs |