Table 3. Genome statistics
From: Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9
Attribute | Value | % of totala |
|---|---|---|
Genome size (bp) | 5,442,880 | 100.00% |
DNA coding region (bp) | 4,739,233 | 87.07% |
DNA G+C content (bp) | 3,045,898 | 55.96% |
Total genesa | 5,139 | 100.00% |
RNA genes | 113 | 2.19% |
rRNA operons | 7 | |
Protein-coding genes | 4,952 | 96.36% |
Pseudo genes | 75 | 1.46% |
Genes in paralog clusters | 124 | 2.4% |
Genes assigned to COGs | 3,807 | 74.08% |
Genes assigned in Pfam domains | 4,185 | 81.43% |
Genes with signal peptides | 677 | 13.17% |
Genes with transmembrane helices | 1,227 | 23.87% |
CRISPR repeats | 1 |