Table 3. Genome statistics
From: Draft genome sequence of Arthrospira platensis C1 (PCC9438)
Attributed | Value | % of Total |
|---|---|---|
Genome size (bp) | 6,089,210 | 100.00% |
DNA coding region (bp) | 4,951,337 | 81.31% |
G+C content (bp) | 2,651,568 | 44.68% |
DNA scaffolds | 1 | 100.00% |
Total genes | 6,153 | 100.00% |
Protein coding genes | 6,108 | 100.00% |
RNA genes | 45 | 0.73% |
Genes with protein function prediction | 3,757 | 61.06% |
Genes with enzymes | 952 | 15.47% |
Genes with Transporter Classification | 345 | 5.61% |
Genes assigns to KEGG pathways | 1,012 | 16.45% |
Genes assigned to KEGG Orthology (KO) | 1,837 | 29.86% |
Genes assigned to COGs | 3,459 | 56.22% |
Genes assigned to Pfam | 3,529 | 57.35% |
Genes assigned to TIGRfam | 1,180 | 19.18% |
Genes assigned to InterPro | 4,244 | 68.97% |
Genes assigned in paralog clusters | 1,048 | 17.03% |
Genes assigned with signal peptides | 570 | 9.26% |
Genes assigned with transmembrane proteins | 1,094 | 17.78% |