Table 3. Genome Statistics
From: Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 6,919,729 | 100.00% |
DNA coding region (bp) | 6,063,039 | 87.62% |
DNA G+C content (bp) | 3,212,364 | 46.42% |
Number of replicons | 6 | Â |
Extrachromosomal elements | 5 | Â |
Total genes | 6,025 | 100.00% |
RNA genes | 51 | 0.85% |
rRNA operons | 2 | Â |
tRNA genes | 43 | 0.71% |
Protein-coding genes | 5,974 | 99.15% |
Pseudo genes | 182 | 3.02% |
Genes with function prediction | 3,599 | 59.73% |
Genes in paralog clusters | 3,238 | 53.74% |
Genes assigned to COGs | 3,912 | 64.93% |
Genes assigned Pfam domains | 4,008 | 66.52% |
Genes with signal peptides | 1,748 | 29.01% |
Genes with transmembrane helices | 1,350 | 22.41% |
CRISPR repeats | 0 | Â |