Table 4. Number of genes associated with the general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 154 | 6.4 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 119 | 5.0 | Transcription |
L | 126 | 5.3 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 33 | 1.4 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 46 | 1.9 | Defense mechanisms |
T | 283 | 11.8 | Signal transduction mechanisms |
M | 177 | 7.4 | Cell wall/membrane/envelope biogenesis |
N | 127 | 5.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 96 | 4.0 | Intracellular trafficking, secretion, and vesicular transport |
O | 102 | 4.3 | Posttranslational modification, protein turnover, chaperones |
C | 168 | 7.0 | Energy production and conversion |
G | 73 | 3.1 | Carbohydrate transport and metabolism |
E | 129 | 5.4 | Amino acid transport and metabolism |
F | 57 | 2.4 | Nucleotide transport and metabolism |
H | 107 | 4.5 | Coenzyme transport and metabolism |
I | 40 | 1.7 | Lipid transport and metabolism |
P | 134 | 5.6 | Inorganic ion transport and metabolism |
Q | 21 | 0.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 229 | 9.6 | General function prediction only |
S | 175 | 7.3 | Function unknown |
- | 750 | 26.1 | Not in COGs |