Table 4. Number of genes associated with the 21 general COG functional categories
From: Complete genome sequence of Anaerococcus prevotii type strain (PC1T)
Code | Value | % | Description |
|---|---|---|---|
J | 133 | 7.2 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 118 | 6.4 | Transcription |
L | 105 | 5.7 | Replication, recombination and repair |
B | 1 | 0.1 | Chromatin structure and dynamics |
D | 20 | 1.1 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 55 | 3.0 | Defense mechanisms |
T | 43 | 2.3 | Signal transduction mechanisms |
M | 69 | 3.7 | Cell wall/membrane biogenesis |
N | 5 | 0.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 19 | 1.0 | Intracellular trafficking and secretion |
O | 61 | 3.3 | Posttranslational modification, protein turnover, chaperones |
C | 84 | 4.5 | Energy production and conversion |
G | 144 | 7.8 | Carbohydrate transport and metabolism |
E | 107 | 5.8 | Amino acid transport and metabolism |
F | 61 | 3.3 | Nucleotide transport and metabolism |
H | 56 | 3.0 | Coenzyme transport and metabolism |
I | 37 | 2.0 | Lipid transport and metabolism |
P | 102 | 5.5 | Inorganic ion transport and metabolism |
Q | 9 | 0.5 | Secondary metabolites biosynthesis, transport and catabolism |
R | 84 | 4.5 | General function prediction only |
S | 118 | 6.4 | Function unknown |
- | 431 | 23.3 | Not in COGs |